PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0033ss01140.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 426aa    MW: 47816.6 Da    PI: 8.9943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0033ss01140.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-16144195155
                AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  Vang0033ss01140.1 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 195
                        89****99**********99966...3.6*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.28527109IPR001471AP2/ERF domain
SMARTSM003801.7E-470115IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-775111IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.9E-775110IPR001471AP2/ERF domain
CDDcd000184.76E-26144205No hitNo description
PfamPF008475.4E-12144195IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-18144205IPR016177DNA-binding domain
PROSITE profilePS5103218.953145203IPR001471AP2/ERF domain
SMARTSM003802.7E-26145209IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-18145204IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MELAPVKCEL SPRNHRLLVI DGSEVIAAKC VKRRRRGSSM SVLGGNEQQG EKLEEHKQLG  60
TATTVKRSSR FRGVSRHDLR AYNDEEAAAR AYDLAALKYW GTSTFTNFPV SDYEKEIEIM  120
KTVTKEEYLA SLRRRSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYSTQE  180
EAARAYDIAA IEYRGINAVT NFDLSTYIRW LRPGTQPIAS HDQKPGTDPQ PFATSNSMQT  240
RGNIEVSNSN MHSFSSAELD STKKQDFSKY MNPLSPCNKP SSPTALGLLL KSTVFRELMQ  300
RNLNSSSEEG EEVELKYPQE GNDGNGGTYY SDNTSNSYFC SSDINRLPNL ESPEESSLPI  360
NICLTWTCPT VMTLFLAQPT LVLPSRDRVS FTRNNFRTGS AVMAELVTYF TLSVFYHSPL  420
SKAYP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007153839.10.0hypothetical protein PHAVU_003G069000g
TrEMBLA0A0S3R1V10.0A0A0S3R1V1_PHAAN; Uncharacterized protein
STRINGGLYMA18G16236.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.22e-44ERF family protein